Re: [Bioc-devel] Recreating nebbiolo1's build environment

2022-01-11 Thread sergi sayols puig
Hi Hervé, Very helpful :) thanks for looking into this. Best, Sergi Missatge de Hervé Pagès del dia dt., 11 de gen. 2022 a les 17:59: > > Today's results for rrvgo: > >https://bioconductor.org/checkResults/3.15/bioc-LATEST/rrvgo/ > > The vignette error is gone. There are still some errors b

Re: [Bioc-devel] Recreating nebbiolo1's build environment

2022-01-11 Thread Hervé Pagès
Today's results for rrvgo:   https://bioconductor.org/checkResults/3.15/bioc-LATEST/rrvgo/ The vignette error is gone. There are still some errors but they are different (org.Pf.plasmo.db was deprecated in BioC 3.14 and got removed from BioC 3.15). H. On 11/01/2022 09:28, Hervé Pagès wrote

Re: [Bioc-devel] Recreating nebbiolo1's build environment

2022-01-11 Thread Hervé Pagès
Hi Sergi, I can't reproduce this on my laptop either (Ubuntu 21.10) or on nebbiolo1. And it looks like the build results for rrvgo will look fine on all platform today (report not available yet). I suspect that the error was coming from a package that rrvgo depends on and that it's been fixe

[Bioc-devel] Recreating nebbiolo1's build environment

2022-01-11 Thread sergi sayols puig
Dear all, Our package rrvgo has recently started to fail when building for BioC 3.15 (devel branch). I'm trying to replicate the build environment as in nebbiolo1 in order to reproduce the issue locally, with little success so far. I'm following carefully the instructions provided in the build rep