Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-11 Thread Hervé Pagès
On 3/11/21 7:45 AM, Oluwafemi OLUSOJI wrote: Hello Herves, I finally solved this. It had more to do with my commits than the package itself. There is this error message when the package is built on a Windows server. What am I to do about this? The flowCore package cannot currently be insta

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-11 Thread Oluwafemi OLUSOJI via Bioc-devel
Hello Herves, I finally solved this. It had more to do with my commits than the package itself. There is this error message when the package is built on a Windows server. What am I to do about this? Regards, Daniel === R CMD BUILD ===

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-11 Thread Oluwafemi OLUSOJI via Bioc-devel
Hello Herve, Thank you for the insight, but after rewriting the man pages by hand. I still get the same error after the latest commit. I am really at a loss here because this builds perfectly on my system. Regards, Daniel Op do 11 mrt. 2021 om 03:11 schreef Hervé Pagès : > Hi, > > I don't see t

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-10 Thread Hervé Pagès
Hi, I don't see that you have aliases for these symbols, hence the warning: hpages@spectre:~/cyanoFilter/man$ grep 'alias{PhytoFilter}' *.Rd hpages@spectre:~/cyanoFilter/man$ grep 'alias{clusterExtract}' *.Rd etc... Note that even though you have aliases for some PhytoFilter **methods**:

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-08 Thread Oluwafemi OLUSOJI via Bioc-devel
Hello, It is a package I recently submitted, cyaniFilter. Thank you for the prompt response. Regards, Daniel On Tue, Mar 9, 2021, 00:09 Nitesh Turaga wrote: > Hi > > We can help you better if you tell us which package you are talking about ? > > Best, > > Nitesh > > On 3/8/21, 5:46 PM, "Bioc

Re: [Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-08 Thread Nitesh Turaga
Hi We can help you better if you tell us which package you are talking about ? Best, Nitesh On 3/8/21, 5:46 PM, "Bioc-devel on behalf of Oluwafemi OLUSOJI via Bioc-devel" wrote: Dear All, I get this warning on the latest update of my package. The warning occurs only with Mac a

[Bioc-devel] Warnings on R CMD check on Mac OS and Linux

2021-03-08 Thread Oluwafemi OLUSOJI via Bioc-devel
Dear All, I get this warning on the latest update of my package. The warning occurs only with Mac and Linux. I am a bit at loss here. These errors don't actually exist because these functions and methods are properly documented. The missing link doesn't even exist anymore. I have rebuilt both the