[Bioc-devel] ensemblVEP: 'fork' argument for 'VEPParam' should be integer

2013-02-27 Thread Julian Gehring
Hi, 'VEPParam' allows to set the parameters for the ensembl VEP perl script, and the documentation of 'ensemblVEP' specifies: """ - fork: ‘logical’, default FALSE; enable forking """ However, looking at the VEP documentation (http://www.ensembl.org/info/docs/variation/vep/vep_script.html#f

Re: [Bioc-devel] ensemblVEP: 'fork' argument for 'VEPParam' should be integer

2013-02-27 Thread Valerie Obenchain
Thanks for catching this. A fix is checked in to 0.99.13. It's great to have a tester for this package. Let me know if you have suggestions/feedback for the user interface, how the param options are specified etc. Valerie On 02/27/13 07:25, Julian Gehring wrote: Hi, 'VEPParam' allows to s