Re: [Bioc-devel] error related to kmp_runtime.cpp(6480)

2017-04-24 Thread Hervé Pagès
Hi Vlad, veracruz2 uses clang 4.0.0 instead of the compilers shipped with Xcode. See: http://www.bioconductor.org/checkResults/devel/bioc-LATEST/veracruz2-NodeInfo.html About 1 month ago the CRAN folks decided to use El Capitan + clang 4.0.0 for building the R and package binaries distributed

Re: [Bioc-devel] error related to kmp_runtime.cpp(6480)

2017-04-24 Thread Martin Morgan
On 04/24/2017 04:43 PM, Vladislav Petyuk wrote: My package passes all the builds except OS X. http://www.bioconductor.org/checkResults/devel/bioc-LATEST/MSnID/veracruz2-buildsrc.html Interestingly, the build goes just fine (with the same arguments) on my laptop, which is OS X 10.12.3. Given th

[Bioc-devel] error related to kmp_runtime.cpp(6480)

2017-04-24 Thread Vladislav Petyuk
My package passes all the builds except OS X. http://www.bioconductor.org/checkResults/devel/bioc-LATEST/MSnID/veracruz2-buildsrc.html Interestingly, the build goes just fine (with the same arguments) on my laptop, which is OS X 10.12.3. Given that kmp_runtime.cpp is from OpenMP and chunk 25 in