Hi,
Sounds good- that's something I haven't run. I ran R CMD check after adding
the .Rcheck file with BioC flags but this sounds different.
But will look up how to run this.
Thanks, Herve.
Shraddha
On Fri, Jun 14, 2019 at 8:02 PM Pages, Herve wrote:
> Sounds good. Also don't forget to run 'R
Sounds good. Also don't forget to run 'R CMD BiocCheck' on the source
tarball of the package. Right now it reports a lot of problems:
hpages@spectre:~$ R CMD BiocCheck netDx_0.99.0.tar.gz
...
Summary:
ERROR count: 3
WARNING count: 7
NOTE count: 12
Once everything is ready,
Hi,
Ok thank you.
I should probably comment out some time-consuming steps in the vignettes
and just include the output in the companion data set, read those in.
Thanks, will do that before next push to master.
Best S
On Fri, Jun 14, 2019 at 7:37 PM Pages, Herve wrote:
> On 6/14/19 15:58,
On 6/14/19 15:58, Shraddha Pai wrote:
> Hi,
>
> Thanks Herve. I have actually spent weeks making sure my packages passed
> check and build following guidelines. So I am actually doing my best and
> your snarky remark is not appreciated.
OK maybe. But please note that our guidelines say that
Hi,
Thanks Herve. I have actually spent weeks making sure my packages passed
check and build following guidelines. So I am actually doing my best and
your snarky remark is not appreciated.
Then at the very end I expanded the DESCRIPTION file by putting in line
breaks in the "description" field,
Hi,
From the Linux command line:
git clone https://github.com/BaderLab/netDx
R CMD INSTALL netDx
* installing to library ‘/home/hpages/R/R-3.6.r76454/library’
Error: error reading file '/home/hpages/sandbox/netDx/DESCRIPTION'
R CMD build netDx
* checking for file
Hello BioC dev community,
I just submitted a package to BioC.
1) The automatic build gave it an "ABNORMAL" status with the following
error " Accessing git_info complete. get_dcf_info failed; could not open."
https://github.com/Bioconductor/Contributions/issues/1149
I've Googled a bit and cannot
