Re: [Bioc-devel] use -Wa, -mbig-obj -O3 when building package under Windows

2019-05-28 Thread Martin Maechler
> Kasper Daniel Hansen > on Fri, 24 May 2019 10:31:31 -0400 writes: > [ This is a crazy bug where you have to increase optimization. ] > I some to add here. I am involved in at least two packages which requires > overriding the optimization switch to downgrade

Re: [Bioc-devel] use -Wa, -mbig-obj -O3 when building package under Windows

2019-05-24 Thread Ramon Diaz-Uriarte
Dear Kasper, Thank you very much. Using what you do in affxparser I can have the -O settings at will. (It turns out that did not solve the "too many sections" problem though, as now the linker never exists; but that is a different story ---I am currently trying to see if I can get it to work

Re: [Bioc-devel] use -Wa, -mbig-obj -O3 when building package under Windows

2019-05-24 Thread Kasper Daniel Hansen
[ This is a crazy bug where you have to increase optimization. ] I some to add here. I am involved in at least two packages which requires overriding the optimization switch to downgrade optimization. You have an additional problem where you need to add additional flags. The solution in

[Bioc-devel] use -Wa, -mbig-obj -O3 when building package under Windows

2019-05-24 Thread Ramon Diaz-Uriarte
Dear All, For a package we develop, OncoSimulR (https://bioconductor.org/packages/release/bioc/html/OncoSimulR.html), we have added new functionality (https://github.com/rdiaz02/OncoSimul/tree/freq-dep-fitness) that uses the ExprTk library[1] for parsing and evaluation of mathematical