Re: Sequence.hs

2014-04-23 Thread Vasili I. Galchin
Ketil, I was suspicious of that ... not a pejorative comment BTW. Thx. Vasya On Thu, Apr 24, 2014 at 12:15 AM, Ketil Malde wrote: > > Vasili I. Galchin writes: > >> Why are there three Fasta representation-dependent functions (toFasta, >> toFastaQual, toFastQ) doing in Sequence.hs which presu

Re: Sequence.hs

2014-04-23 Thread Ketil Malde
Vasili I. Galchin writes: > Why are there three Fasta representation-dependent functions (toFasta, > toFastaQual, toFastQ) doing in Sequence.hs which presumably is meant > to be Sequence representation-free code? Because they are the standard formats, least common denominators, so to speak? Al

Re: Sequence.hs

2014-04-23 Thread Vasili I. Galchin
Fasta vs TwoBit ... .sorry if I am comparing apples and oranges I have been away from this stuff for several months ... . Vasili On Wed, Apr 23, 2014 at 8:20 PM, Vasili I. Galchin wrote: > Hi BioHaskellers, > > Why are there three Fasta representation-dependent functions (toFasta, > toFasta

Sequence.hs

2014-04-23 Thread Vasili I. Galchin
Hi BioHaskellers, Why are there three Fasta representation-dependent functions (toFasta, toFastaQual, toFastQ) doing in Sequence.hs which presumably is meant to be Sequence representation-free code? Vasili