Hi.
I'm off for a long weekend, but I'll look at this properly early next
week. There are three constants on StrandedFeature that define
strandedness (POSITIVE, NEGATIVE, UNKNOWN) which may be more apropreate
than the boolean constructor arg.
The code looks good to me. Great work.
M
Dr S.M.
Okay, I've checked in the build.xml changes:
targets:
compile
compiletests compiles JUnit tests
package builds the biojava.jar file (default)
runtests runs JUnit tests
javadocs
dist
dist-zip'binary' release (jar & documentation) in zip format
dist-
I have been thinking about some means of doing overdraw in biojava, ie.
have renderers draw into the same space.
Would it be reasonable to make a class similar to MultiLineRenderer that
allowed something like
addRenderer(renderer, OverlayRenderer.OVERLAY);
When asked to overlay, the offset with
I started to work on this at biojava bootcamp, didn't get very far because
of the following:
seq.db.SequenceDB currently have the following methods that one cannot
implement for 'remote' databases.
< Set ids();
< SequenceIterator sequenceIterator();
< void addSequence(Sequence seq)
< t
Hi -
I very much favour the idea of having a remote SequenceDB rather than
breaking the substantial amount of code that uses SequenceDB. I use
SequenceDB all the time in my programs so I guess I am keen to not have to
recode it all.
As for parsing an unknown sequence type a simple (and inneffici
On Wed, 16 May 2001, Schreiber, Mark wrote:
> Hi -
>
> I very much favour the idea of having a remote SequenceDB rather than
> breaking the substantial amount of code that uses SequenceDB. I use
> SequenceDB all the time in my programs so I guess I am keen to not have to
> recode it all.
>
Agre
