[Biojava-l] More ssbind builders

2001-11-12 Thread Keith James
I've added SimilarityPairBuilder.java to the ssbind package. This will annotate views of the query and subject sequences with SimilarityPairFeatures. This brings the current complement of builders to: BlastLikeSearchBuilder (builds SeqSimilaritySearchResult objects) BlastLikeHomologyBuilder (

Re: [Biojava-l] problems getting packages recognized

2001-11-12 Thread Andy Hunsucker
Yes, this class is outside the heirarchy. When I compile the program, it gives a "cannot resolve symbol" error on the line in which I instantiate the variable to use in the program. For instance: RNA gc = new RNA(); It will give me an error on this line. But when I remove the import commands

Re: [Biojava-l] problems getting packages recognized

2001-11-12 Thread Andy Hunsucker
Thanks for your help, I got it figured out. - Original Message - From: "David Huen" <[EMAIL PROTECTED]> To: "Andy Hunsucker" <[EMAIL PROTECTED]> Cc: <[EMAIL PROTECTED]> Sent: Monday, November 12, 2001 2:50 AM Subject: Re: [Biojava-l] problems getting packages recognized > On Mon, 12 Nov

[Biojava-l] OmniDAS API is released

2001-11-12 Thread Brian Gilman
Hello All, OmniDAS 0.1 is released you can play with the API at: http://www.sourceforge.net/projects/omnigene We have also placed a new build of OmniView in CVS which updated fasted and gives back better user feedback. Best,