Re: [Biojava-l] Taxa/Taxon class/method naming

2002-03-10 Thread Matthew Pocock
Keith James wrote: > There's a bit of a problem with naming in the Taxa package. Most of > the cases where the word "Taxa" (plural) is used should be replaced > with "Taxon" (singular). I'm not picky about spelling, but I think it > could be misleading e.g. I'd expect org.biojava.bio.taxa.Taxa to

Re: [Biojava-l] LIMS framework- an open-bio project proposal

2002-03-10 Thread Matthew Pocock
Alex Rolfe wrote: > Do the other packages in the biojava tree (dazzle, das-client, etc) have > dependencies on biojava? My concerns with putting the lims code under > the biojava tree are (1) it doesn't depend on biojava, so that may or > may not be a logical place for it and (2) at some point,

[Biojava-l] Javadocs out of memory?

2002-03-10 Thread Schreiber, Mark
Hi - When I run the command ant javadocs it tells me I am out of memory see below, how can I fix this? ///truncated [javadoc] Loading source files for package org.biojava.directory... [javadoc] Constructing Javadoc information... [javadoc] javadoc: warning - Cannot find class org.biojava

Re: [Biojava-l] Javadocs out of memory?

2002-03-10 Thread David Huen
On Mon, 11 Mar 2002, Schreiber, Mark wrote: > Hi - > > When I run the command ant javadocs it tells me I am out of memory see > below, how can I fix this? > I notice in build.xml for the javadoc target:- Might it be the maxmemory attribute? Then again, does your machine have a

RE: [Biojava-l] Javadocs out of memory?

2002-03-10 Thread Schreiber, Mark
Hi - Thanks to whoever updated the max memory allotment in the build.xml on CVS, it works fine now :) Mark > -Original Message- > From: Schreiber, Mark > Sent: Monday, 11 March 2002 8:52 a.m. > To: [EMAIL PROTECTED] > Subject: [Biojava-l] Javadocs out of memory? > > > Hi - > > When