Hi Mike,
We don't have a CGI client for fetching genbank, embl or swissprot
files. There have been more than a few requests for that functionality
recently. There is a BioFetch client (org.biojava.bio.seq.db.biofetch),
which may do what you need.
I'll take a look at porting Bio::DB::BenBank t
On Sun, 17 Mar 2002, Matthew Pocock wrote:
> Hi Mike,
>
> We don't have a CGI client for fetching genbank, embl or swissprot
> files. There have been more than a few requests for that functionality
> recently. There is a BioFetch client (org.biojava.bio.seq.db.biofetch),
> which may do what y
On Sat, Mar 16, 2002 at 01:21:38PM +0100, Andrey Zinovyev wrote:
>
> 2) Did somebody implement such methods as Principal components analysis
> (Singular value decomposition), Self-organizing maps?
Take a look at the Colt library:
http://tilde-hoschek.home.cern.ch/~hoschek/colt/
This includ
On Fri, Mar 15, 2002 at 01:51:07PM -0500, Marc Colosimo wrote:
> Thomas Down <[EMAIL PROTECTED]> wrote:
>
> > Hi...
> >
> > I'm considering adding a filter(FeatureFilter); method to
> > SequenceDB, which allows features to be extracted from a
> > whole database, rather than just a single sequence
> Would you be interested in writing new phylogeny algorithms?
> Or parsers/object models to facilitate the use of existing
> tools? Either way, it could be an interesting project.
>
> Good luck -- and don't hesitate to drop a message to this list
> if you've got any questions,
>
> Thomas.
I
