Re: [Biojava-l] BioJava discussion board

2002-08-29 Thread Patrick McConnell
I do not know of many other biology web services. We are currently developing some here for in-house use. Of these, we have developed a web service for blast that takes all of the blast parameters as structured XML, and returns the blast output as structured XML. The burden on the client and s

Re: [Biojava-l] BioJava discussion board

2002-08-29 Thread Patrick McConnell
Looking at the schema, I believe that you can push around annotations without the sequence. The root element, sciobj, can have zero or more of any of the following: bio_sequence contig FeatureSet chromosome. So, I think what you are looking for is the FeatureSet, which c