Hi Matthew,
On Friday, March 21, 2003, at 05:05 AM, Matthew Pocock wrote:
It's a problem, isn't it. The documentation should
certainly be added. I'm a little uneasy about
StrongRefChangeSupport because it's usualy the one
registering the listener that needs to know if the
reference is strong or w
What is the plan for a biojava1.3pre2 rollout? Is there a cvs branch or is
it coming from biojava-live? Is there a release date set.
David
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hi there
I am using Ht-Blast and i am calling JAVA servlet which invokes HT-BLAST
command but the output which I am getting is right but not in the format as
you get with other blast programs. It seems BLAST2HTML program does not work
with that format.I am taking output from HT_BLAST and writing
Hi,
I use a SequenceFormat.writeSequence(Sequence seq, java.io.PrintStream os)
and it seems to have a bug in some case.
The simple code reads entry of accession "J01566"
and write a file.
But circular location is changed as follows.
Original
CDS
I am still interested in the SequencePoster! Unless I am missing something,
the SequencePanel and TranslatedSequencePanel only render over one line. The
ability to wrap the display to a number of lines is visually very appealing,
especially when working with shorter sequences such as proteins (as I
Hi there!!
I've been working on viterbi training, but now I have found a problem.
When I try to set a transition weigth to 0 (zero), every value in that
distribution change.
Exemple:
I have state a state with 3 transitions. when I set a distribution
weigth to 0, every
value in that distribution
hi there
I am using HT-blast for SGI IRIX systems. I have been trying to use BLAST2HTML
program of biojava for my output but I think output genrated is not in the
format that BLAST2HTMl program needs. So i tried to used the code given for
blast parsing at "biojava in anger" webiste. I have been
Hi, I just started using Biojava and was playing with the various IO stuff
and I noticed that some of the fasta format files I had, which contained
both N's and X's *X's were created from a vector screen program cross match*
were having the X's replaced with N's.
Is this a bug or supposed to ha
