Hi Frederik,
Well, I'm still plugging away at this error. Yours is gone, but my old
error is back. I have modified java.utils.JDBCConnectionPool to test
existing connections using SELECT 1, which as removed the exceptions
about roll-backs. However, now it appears that postgresql does not
maint
Hi:
I am stuck in the exmaple of PHMM at
http://www.biojava.org/docs/bj_in_anger/profileHMM.htm
Could somebody tells me how to code to initialize
the test sequence, as told in the exmaple? I would
very much appreciate your kind help.
Thanks & best regards!!
_
Matthew Pocock wrote:
More news when I have it.
I have more news :)
The version in CVS works for me. I had to do some work to the
OntologySQL class, and modify the biosql schema (which I've attached).
In the end, I removed the symptom by dissabling connection re-use in
JDBCConnectionPool. Coul
Matthew Pocock wrote:
> The version in CVS works for me. I had to do some work to the
> OntologySQL class, and modify the biosql schema (which I've attached).
Can you include some tests for correct ontology persistence into the
DB tests I wrote?
> BioSQL People - could you check the single tab
Hilmar Lapp wrote:
> On Tuesday, October 14, 2003, at 02:37 PM, Len Trigg wrote:
>
> >> BioSQL People - could you check the single table I've added
> >> (term_relationship_term) and see if it's sane for folding back into
> >> the
> >> trunk of biosql development?
> >>
>
> What's this table? -hi
As some have suggested, I checked the following:
I have the bytecode.jar file as shown
-rwxrwxr-x1 ahammer ahammer 91K Jul 28
08:18 bytecode.jar
My PATH has no old biojava.jar references
PATH =
.:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/home/ahammer/bin:/usr/java/bin:/usr/ant/bin
A
