On Friday 27 Feb 2004 9:36 pm, Orion Hunter wrote:
> So, I added
>
> /home/user/biojava/main to my classpath, since org.biojava.* sits in this
> directory (maybe this should be mentioned in the getting started page).
> I got rid of all my compile errors, but am encountering runtime errors
> now:
>
Hey all,
I built a markov model using the Biojava package and am having an
incredibly hard time using it on sequences that I have stored in fasta
format on a file. The problem is that I specified my own SimpleAlphabet,
for protein sequences using the one letter amino acid code much like the
dishon
Thanks for the response. I got everything working, but it took a little
tweaking.
First off, I never found the biojava-live directory. I know I had ANT
installed correctly, because it worked from the command line... but I never
found the biojava-live nor the build.xml that ant looks for.
So,
