Hi,
I want to put a two-headed markov model in a SimpleModelInState.
But when I attempt to call DPFactory.DEFAULT.createDP, I get a
NullPointerException from inside the org.biojava.bio.dp.FlatModel
constructor.
I get the same problem from the biojava-1.30-jdk13.jar,
biojava-1.30-jdk14.jar, and b
Hi,
I'm new to biojava so I don't know if this has already been asked. I have a genome
sequence and I want to have it in the 6 reading frames, and then per reading frame
translated into amino acids so I can look for proteins. I don't know how I have to do
it.
Thanks,
Gera
<>_
Hi Gera -
The code below seems to work for me. Please note that I have not tested it
thoroughly so you might want to eyeball a few results to make sure they
are sensible.
You could probably improve it by making some of the 'in line' code into
methods etc.
- Mark
import java.io.*;
import org
