[Biojava-l] RestrictionEnzymeManager

2004-04-08 Thread Khalil El Mazouari
Hi I am trying to use the RestrictionEnzymeManager with a new REBASE file. I followed the recommendation concerning the RestrictionEnzymeManager.properties file and the CLASSPATH, but the RestrictionEnzymeManager still load the default RestrictionEnzymeManager.properties file that came with bio

[Biojava-l] Problem parsing Genbank files

2004-04-08 Thread Fenger, Doug
Hi, I've been using biojava-1.3.1 to parse some Genbank files, similar to the FilterEMBLBySpecies code at BioJava in Anger. The problem is that with some Genbank files I get an IllegalArgumentException. I believe it's caused when the Feature has a single base for a Location (such as in Genbank