[Biojava-l] blast parser alignment middle line

Hello! Is there a way to get the middle line of an alignment that I parse out of the blast output? In the example below, it would be the "S++VGTR..." line. In the Alignment of the SeqSimilaritySearchSubHit, I only find a Sequence entry for Query and Sbjct. Query: 2 SFEVGTRCWYPHKELGWIGAEVIKNEFN

[Biojava-l] bioperl graph - different glyph on the same track

Hi everybody, I want to generate something like this: _ ||---| |- -- segments are colored differently, if I use cds, or segments glyph type, the whole thing is one feature, cannot be colored