[Biojava-l] Exception not being caught.

2004-12-28 Thread Richard HOLLAND
I am getting an exception thrown by my code that never seems to get caught. I am not sure if this is because of BioJava or because of a lack of understanding of Exceptions on my part? The exception causes the program to grind to an immediate halt. My method throws the general Exception class, but t

Re: [Biojava-l] Exception not being caught.

2004-12-28 Thread Michael Heuer
On Wed, 29 Dec 2004, Richard HOLLAND wrote: > I am getting an exception thrown by my code that never seems to get > caught. I am not sure if this is because of BioJava or because of a lack > of understanding of Exceptions on my part? The exception causes the > program to grind to an immediate hal

RE: [Biojava-l] Exception not being caught.

2004-12-28 Thread Richard HOLLAND
Hi, I resolved the exception by adding a trim() call to truncate whitespace from the ends of the sequence before passing it to DNATools. There were some weird trailing blank symbols, \0, \r, \n and the like. Fair enough that it threw a wobbly when it encountered these. However, I am sure there are

[Biojava-l] CVS

2004-12-28 Thread Felipe Albrecht
Hello, I'm a computer science student and I intent study biomolecular with bioinformatic. I have a good skills with java platform and I love to code and study biomolecular. I want work with biojava, and for while, for understand better the biojava, I thing to help biojava's upgrade, from java 1.