[Biojava-l] location of biojava.jar on a linux system

2005-02-10 Thread Andy Hammer
Hello all. I had some apps I wrote with biojava that I wanted to run on a linux system. I do not have root privliges and wondered where I could put biojava.jar to make my application run. The name of the app is MotifSearch.jar. I have tried putting bytecode.jar, xerces.jar and biojava.jar in th

Re: [Biojava-l] location of biojava.jar on a linux system

2005-02-10 Thread David Huen
On Thursday 10 Feb 2005 19:15, Andy Hammer wrote: > Hello all. If you are running the app as a jar, you appear to need to define an env var CLASSPATH that has the jars required. I've never had much joy with defining the classpath on the command line itself but that might just be incompetence o

Re: [Biojava-l] location of biojava.jar on a linux system

2005-02-10 Thread Rahul Karnik
>>java -classpath . -jar MotifSearch.jar "-cp ." only works with unzipped jar files. In your case, I would use: java -cp xerces.jar:biojava.jar: -jar MotifSearch.jar Hope that helps, Rahul ___ Biojava-l mailing list - [email protected] http://bi