Re: [Biojava-l] Newbie struggling with secondary structure

2006-02-07 Thread Andreas Prlic
Hi Tjaart, The PDB parser currently does not parse all of the header - the HELIX and SHEET lines containing the author's secondary structure assignments are are currently ignored. An alternative is simply to write a class which reads all the lines starting with HELIX or SHEET for the moment

[Biojava-l] BioJava News site

2006-02-07 Thread mark . schreiber
Dear subscribers - BioJava has a new news and blog site based on WordPress. It can be found at http://biojava.open-bio.org/news/ I have copied some of the more recent news items over and added a few new ones. Feel free to subscirbe and or contribute. All major biojava announcements will be pos

[Biojava-l] BioJava wiki

2006-02-07 Thread mark . schreiber
Dear BioJava users. The biojava wiki website has been up for a few days at http://biojava.open-bio.org/wiki/Main_Page. Thanks to the amazing efforts of a few early volunteers almost all of the content of the old site has been transfered to the new page. I think that the best part is that now