Andreas Tille pushed to branch master at Debian Blends Team / debug
Commits: cfcc1f93 by Andreas Tille at 2020-06-18T21:46:26+02:00 Small debugging example - - - - - 1 changed file: - tasks/covid-19 Changes: ===================================== tasks/covid-19 ===================================== @@ -5,82 +5,13 @@ Description: This task exists only for tagging COVID-19 relevant cases COVID-19 Biohackathon (April 5-11, 2020) This task was created only for the purpose to list relevant packages. -X-Mark: <bio> +Recommends: abacas -Recommends: cwltool, snakemake +Recommends: bwa -Recommends: augur, auspice +Recommends: covtobed -Recommends: chime +Recommends: lastz -Recommends: chip-seq +Recommends: acacia -Recommends: fastqc - -Recommends: nextstrain-ncov -Remark: needs auspice - -Recommends: r-bioc-rcpi - -Recommends: r-cran-mediana - -Recommends: r-bioc-tcgabiolinks -Remark: Non-distributable due to locfit dependency - -Recommends: r-cran-spp - -X-Mark: TODO: Check out -X-Mark: https://www.bioinformatics.babraham.ac.uk/projects/index.html -X-Mark: for further tools - -X-Mark: </bio> - -X-Mark: <imaging> - -Recommends: aeskulap - -Recommends: conquest-common - -Suggests: conquest-dbase, conquest-mysql, conquest-postgres, conquest-sqlite - -Recommends: dcmtk - -Recommends: ginkgocadx - -Recommends: imagej - -Recommends: libgdcm-tools - -Recommends: slicer -Remark: slicer was removed from Debian (see #644352) - Its re-introduction into Debian is prepared by the Debian Med team here - https://salsa.debian.org/med-team/slicer - -Recommends: orthanc - -Suggests: orthanc-webviewer, orthanc-dicomweb, orthanc-imagej, orthanc-postgresql, orthanc-mysql - -Recommends: orthanc-wsi - -X-Mark: </imaging> - -X-Mark: <tools> - -X-Mark: https://opensourceventilator.ie/ -X-Mark: -> https://gitlab.com/open-source-ventilator/OpenLung - -X-Mark: https://www.mikrocontroller.net/topic/491565 -X-Mark: -> https://github.com/jcl5m1/ventilator - -X-Mark: https://sormasorg.helmholtz-hzi.de/Open_source.html -X-Mark: -> https://github.com/hzi-braunschweig/SORMAS-Project - -X-Mark: </tools> - -X-Mark: <preconditions> - -Recommends: streamlit -Remark: Needs help from Debian Science team - This is a machine learning framework which is required by chime. - -X-Mark: </preconditions> View it on GitLab: https://salsa.debian.org/blends-team/debug/-/commit/cfcc1f93dcdf76755edfe6498fe81f54954ea0c1 -- View it on GitLab: https://salsa.debian.org/blends-team/debug/-/commit/cfcc1f93dcdf76755edfe6498fe81f54954ea0c1 You're receiving this email because of your account on salsa.debian.org.
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