Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
24fea3f2 by Andreas Tille at 2020-06-18T14:18:08+02:00
pairtools is python3-pairtools
- - - - -
4 changed files:
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
- tasks/bio
- tasks/covid-19
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -174,7 +174,7 @@ INSERT INTO covid19_packages VALUES
(DEFAULT,'ngmlr'),
(DEFAULT,'oncofuse'),
(DEFAULT,'optitype'),
-(DEFAULT,'pairtools'),
+(DEFAULT,'python3-pairtools'),
(DEFAULT,'parallel-fastq-dump'),
(DEFAULT,'python3-pauvre'),
(DEFAULT,'picard-tools'),
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 18 Jun 2020 11:47:42 +0200
+Last-Update: Thu, 18 Jun 2020 14:12:38 +0200
package | architectures | section |
releases | conda | bio.tools |
testsuite
------------------------+---------------------+----------+-----------------------------------------------------+----------------------+---------------+-------------------------------------
@@ -109,7 +109,7 @@ Last-Update: Thu, 18 Jun 2020 11:47:42 +0200
ngmlr | | |
| | |
oncofuse | | |
https://salsa.debian.org/med-team/oncofuse | |
|
optitype | | |
https://salsa.debian.org/med-team/optitype | |
|
- pairtools | | |
| | |
+ python3-pairtools | | |
| | |
parallel-fastq-dump | all | main | sid
| parallel-fastq-dump | |
python3-pauvre | all | main | bullseye,sid
| | |
autopkgtest
picard-tools | amd64 | main | buster,bullseye,sid
| picard | Picard_tools |
autopkgtest
=====================================
tasks/bio
=====================================
@@ -896,6 +896,8 @@ Recommends: optitype
Recommends: paipline
+Recommends: python3-pairtools
+
Recommends: pal2nal
Recommends: paleomix
=====================================
tasks/covid-19
=====================================
@@ -245,6 +245,8 @@ Recommends: oncofuse
Recommends: optitype
+Recommends: python3-pairtools
+
Recommends: python3-pauvre
Recommends: picopore
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/24fea3f217ec8019b946704384ada000d10ea2cf
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/24fea3f217ec8019b946704384ada000d10ea2cf
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