Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
396ff696 by Andreas Tille at 2020-06-18T17:49:31+02:00
pychopper is python3-pychopper
- - - - -
4 changed files:
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
- tasks/bio
- tasks/covid-19
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -193,7 +193,7 @@ INSERT INTO covid19_packages VALUES
(DEFAULT,'prinseq-lite'),
(DEFAULT,'prodigal'),
(DEFAULT,'pybedtools-bin'),
-(DEFAULT,'pychopper'),
+(DEFAULT,'python3-pychopper'),
(DEFAULT,'pycoqc'),
(DEFAULT,'pyomo'),
(DEFAULT,'python3-pysam'),
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 18 Jun 2020 14:44:56 +0200
+Last-Update: Thu, 18 Jun 2020 17:15:39 +0200
package | architectures | section |
releases | conda | bio.tools |
testsuite
------------------------+---------------------+----------+-----------------------------------------------------+----------------------+---------------+-------------------------------------
@@ -128,7 +128,7 @@ Last-Update: Thu, 18 Jun 2020 14:44:56 +0200
prinseq-lite | all | main | bullseye,sid
| | |
autopkgtest
prodigal | amd64,arm64,ppc64el | main | buster,bullseye,sid
| prodigal | |
autopkgtest
pybedtools-bin | all | main | buster,bullseye,sid
| pybedtools | pybedtools |
autopkgtest-pkg-python
- pychopper | | |
| | |
+ python3-pychopper | | |
| | |
pycoqc | all | main | bullseye,sid
| pycoqc | |
pyomo | | |
| | |
python3-pysam | amd64,arm64,ppc64el | main | buster,bullseye,sid
| pysam | pysam |
autopkgtest, autopkgtest-pkg-python
=====================================
tasks/bio
=====================================
@@ -1031,6 +1031,8 @@ Suggests: python3-loompy
Suggests: python3-pybel
+Suggests: python3-pychopper
+
Suggests: python3-py2bit
Recommends: python3-pybedtools
=====================================
tasks/covid-19
=====================================
@@ -257,6 +257,8 @@ Recommends: poretools
Recommends: pybedtools-bin
+Recommends: python3-pychopper
+
Recommends: pyomo
Recommends: python3-biopython
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/396ff696b67465b30bd88c1c603f9ebade651cad
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/396ff696b67465b30bd88c1c603f9ebade651cad
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