bug#36130: split bug

2019-06-26 Thread Heather Wick
tag 36130 notabug > close 36130 > stop > > Hello, > > On Mon, Jun 10, 2019 at 04:50:20PM -0600, Assaf Gordon wrote: > > On 2019-06-10 12:28 p.m., Heather Wick wrote: > > > Verbose: This seems to have made the same number of files this time; > not > > &

bug#36130: split bug

2019-06-10 Thread Heather Wick
11:39 PM Assaf Gordon wrote: > Hello, > > On Fri, Jun 07, 2019 at 09:48:44PM -0400, Heather Wick wrote: > > Yes, sorry, I should have specified that I already checked that the > > original fastq files are indeed paired and sorted with the same number of > > lines an

bug#36130: split bug

2019-06-07 Thread Heather Wick
at 9:29 PM Assaf Gordon wrote: > Hello, > > On Fri, Jun 07, 2019 at 02:23:15PM -0400, Heather Wick wrote: > > I am using split to split up some large, paired fastq files [...]: > > > > zcat MH1_R1.fastq.gz | split - -l 4000 DHT_R1_ > > zcat MH1_R2.fastq

bug#36130: split bug

2019-06-07 Thread Heather Wick
zcatting and piping the files is not the best way to call split? Thanks, ~ Heather -- Heather Wick PhD Candidate, Human Genetics Labs of Sarah Wheelan and Vasan Yegnasubramanian Institute of Genetic Medicine Johns Hopkins University School of Medicine hwi...@jhmi.edu