[ccp4bb] Default contour levels for SRF in Molrep

2008-01-04 Thread Derek Logan
Hi, What are the default contour levels for the Postscript plot of the self rotation function produced by Molrep? They are not specified in the documentation but Googling turns up a couple of articles where the levels are described as from 0.5 sigma above the mean in steps of 0.5 sigma.

[ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Rajesh Ponnusamy
Do the webcast is working in this link ? http://extrplay.dl.ac.uk/ Thank you Rajesh Ponnusamy

[ccp4bb] Post-doc position at the IBS, Grenoble, France

2008-01-04 Thread Dominique BOURGEOIS
Kinetic protein crystallography of fluorescent proteins. A two-year post-doctoral fellowship is available in the kinetic protein crystallography team of the Institute for Structural Biology (IBS), Grenoble, France (http://www.ibs.fr/content/ibs_eng/presentation/lab/lccp/cinetique/). The

Re: [ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Rajesh Ponnusamy
Hi Jan, I did installed the Real Player 11. But the live streaming does not work :-( Rajesh Ponnusamy Jan Dohnalek wrote: It works for me on an XP machine with Real Player 11. Jan Rajesh Ponnusamy wrote: Do the webcast is working in this link ? http://extrplay.dl.ac.uk/ Thank you

Re: [ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Juergen Bosch
Rajesh Ponnusamy wrote: Do the webcast is working in this link ? http://extrplay.dl.ac.uk/ Thank you Rajesh Ponnusamy Except of the archived lectures nothing works for me, (OS X Safari, Firefox, Linux, Mozilla) I was ready to watch Piet at 6 am PST, but then decided to have another cup

Re: [ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Miller, Mitchell D.
Hi Juergen, I found that if I follow the link for the Jan 4 talks on the http://extrplay.dl.ac.uk/ http://extrplay.dl.ac.uk/CCP4/20080104-1/ It appears that they did not update the link page and are using the same URL for the streaming today that they used yesterday Regards, Mitch P.S. I

Re: [ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Juergen Bosch
://extrplay.dl.ac.uk/CCP4/20080104-1/ It appears that they did not update the link page and are using the same URL for the streaming today that they used yesterday Regards, Mitch P.S. I was using IE v 6 on XP. -Original Message- From: CCP4 bulletin board [mailto:[EMAIL PROTECTED

Re: [ccp4bb] Webcast of the CCP4 study weekend ?

2008-01-04 Thread Miller, Mitchell D.
Sent: Friday, January 04, 2008 10:42 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] Webcast of the CCP4 study weekend ? The error message is that it cannot find rtsp://extrplay.dl.ac.uk/CCP4/20080104-083503-1.rm

[ccp4bb] Calculation of Selection Volumes

2008-01-04 Thread Buz Barstow
Dear All, I'd like to find a way to calculate the volume of an arbitrary selection of atoms in a protein structure. Could anyone suggest a program that could perform this task, ideally, one that could be called from inside pymol and calculate the volume of a pymol selection? Thanks! and

[ccp4bb] VMD question

2008-01-04 Thread Kristin Wunsch
Hello, I am just beginning my PhD research in structural biology and I am trying to make a movie of several consecutive datasets using VMD. I am having problems aligning the PDB file and the density. Is there an easy option I am missing somewhere? I just recently started using VMD. I would

Re: [ccp4bb] Post-doc position at the IBS, Grenoble, France

2008-01-04 Thread bas
- Original Message - From: Dominique BOURGEOIS To: CCP4BB@JISCMAIL.AC.UK Sent: Friday, January 04, 2008 4:18 PM Subject: [ccp4bb] Post-doc position at the IBS, Grenoble, France Kinetic protein crystallography of fluorescent proteins. [...] Candidates should have a strong expertise in

Re: [ccp4bb] scalepack problem

2008-01-04 Thread yang li
Hi,All, I have figured out the mistake, for some reason some -h,-k,-l reflections were missed for the spacegroup given, so the program was not happy with the format. I donnot know how it happened since not me processed the data. Then another question is how the scale porgrams do

Re: [ccp4bb] scalepack problem

2008-01-04 Thread yang li
On Dec 31, 2007 4:06 PM, Noinaj, Nicholas [EMAIL PROTECTED] wrote: Hi, would it be possible for you to send me either your *.sca file or at least just the first 50 lines or so? i have experienced this problem before also, but all i had to do was removed an alpha numerical sequence in the