Re: [ccp4bb] number of peaks in molecular replacement.

2009-12-30 Thread Eleanor Dodson
Too many peaks, all with similar Z scores isnt a very good sign - one prefers high contrast but it is hard to make a rule - it depends on many factors; number of molecules in asymmetric unit, similarity of model and new structure, data quality, etc etc.. The automated procedures, MrBump or Bal

[ccp4bb] Post-doctoral positions (x2) in Protein Crystallography at the Research Complex at Harwell

2009-12-30 Thread Simon Phillips
Post-doctoral positions (x2) in Protein Crystallography Research Complex at Harwell (RCaH) We have two postdoctoral positions available for protein crystallographers at the Research Complex at Harwell (RCaH), a new laboratory currently nearing completion adjacent to the UK Diamond synchrotr

[ccp4bb] Build the sugars in COOT

2009-12-30 Thread JXQI
Dear All: Sorry for this off-topic subject. This maybe an old topic, but I could not find the previous discussion about it. There are some sugars, i.e.,NAD and NDG that form covalent bonds with ASN in my protein.I tried to load the NAG by "Got Monomer" in COOT, but I couldn't build the co

Re: [ccp4bb] Build the sugars in COOT

2009-12-30 Thread Paul Emsley
JXQI wrote: > Dear All: > > Sorry for this off-topic subject. It's not off topic. CCP4BB is for protein crystallography. Discussions of crystallographic programs are particularly ON TOPIC! But so are media, viruses, vectors and buffers... Having said that, you might like to consider the Coot mail

Re: [ccp4bb] CCP4 in snow leopard

2009-12-30 Thread charles . ballard
Hi yes, it will. If you go to the ftp site. ftp.ccp4.ac.uk you will find the beta of 6.1.3 under ccp4/6.1.3-beta (or similar). It will actually be 6.1.3 we are pretty happy with it Charles Ballard CCP4 -Original Message- From: CCP4 bulletin board on behalf of Jürgen Bosch Sent: Wed

[ccp4bb] SOLUTION: tcl/tk issue with ccp4 installation 64-bit fedora12

2009-12-30 Thread Mark Del Campo
Okay, I got the problem resolved in the following way (thanks go to Clint Leysath): 1. removed the tcltk++ directory that came with my ccp4 download 2. installed Activestate's tcltk 8.4.19.2 from https://www.activestate.com/activetcl/downloads/ 3. downloaded blt2.4z.tar.gz and the blt2.4z-patch-2