Dear Aidong,
So what are your problems?
Greetings,
Christian
Dr. Christian Rausch rau...@wzw.tum.de
Lehrstuhl f. Biologische Chemie Phone: +49 (0)8161 71-4050
Technische Unive
I would like to draw your attention: Do not rush to set these up
now. There are many problems with quadro card and 3D vision kit
running on linux. We are wasting a lot of time to work out solutions.
Cheers
Aidong
On Mar 3, 2010, at 11:50 PM, Christian Rausch wrote:
Hello,
is someone u
Dear Users,
The deadline for May/June 2010 Collaborative
Crystallography proposals will be *Mar 15, 2010. *
Through the Collaborative Crystallography Program (CC) at the
Advanced Light Source (ALS), scientists can send
Dear colleagues,
We are organizing a course focusing on neutron techniques used in structural
biology. The course is designed for graduate students with knowledge of protein
function and structure but no or limited experience of neutron sciences.
Date: June 7 - June 11, 2010
Location: Oak Ridg
Probably, you have built water molecules that are associated with
symmetry-related macromolecules rather than the host molecule. Turn
symmetry on, check the nearest neighbors of the offending waters, and move
the waters close to the host molecule if appropriate. I believe you can do
this with the
Dear All,
In depositing a pdb file, after validation step, an error comes up:
*Solvent Atoms* The following solvent molecules lie farther than expected
from the protein.
Can any one give me some advice about it?
deleting these water molecules results in a large increase of R factor, by
the way.
Hi Edward
I don't understand, provided the MR program is doing its job, in this
case there are no alternative choices for the space group; all the
alternative space groups are equivalent and should refine equally well
after MR - if they don't there's something badly wrong with your
original data.
Hi Edward
There's no difference between any of the space groups you mention in
terms of which is right or wrong, they are all equivalent: for the
purposes of solving & refining the structure it makes absolutely no
difference which one is chosen. A2, C2 and I2 differ only in the unit
cell and the
Dear All,
I may be asking a dumb question and if so I apologize. I have a ~200
amino acid N-terminal 'arm' of a full protein (C-term already solved)
that diffracts to ~2.1A. It integrates nicely in C2 and gives good
molecular replacement models from Balbes in C121, 1I21, A121, C1211 and
I1211 (
Dear All,
Attached is information about a new X-ray crystallography training program
being introduced at Pennsylvania State University. Kindly pass it along to
anybody that may be interested in such an oppurtunity. Thank you
Neela
<>
Engin,
Cc: ccp4bb
The Innovaplate SD-2 (also known as the MRC 2 well plate, or MRC 2 Lens
Crystallisation Microplate, or Swissci plate) is manufactured exclusively by
Swissci (Switzerland) and distributed by several companies, including Hampton
Research. The plate is manufactured and available
Engin--
We have used the Cybi-Well robot for daughtering from the deep well
masterblocks into our crystallization trays for several years and really
like it. It is made by Cy-Bio.
HTH!
annie
Annie Hassell
Glaxo Smithkline
5 Moore Drive
RTP, NC 27709
919/483-3228
919/483-0368 (FAX)
annie.
Dear Claudia,
Though not a fixed rule, here are a few general things that we consider:
- N- and C-termini of homologs (eg from BLAST)
- Secondary structure predictions
- Disorder prediction (eg disembl or grooms servers)
- Limited proteolysis to experim
Dear all,
I want to install the CCP4 package for our research studies in our lab
system( 2GB RAM, 250 HD, windows server).
But confused about the various versions like CCP4 for Linux OS and Windows
OS .
Please inform about the details of both versions.
I have queries like, which one have all the m
Dear Pedro,
This was fixed in ARP/wARP version 7.1 in January this year. We informed
all who downloaded the software before the fix, but perhaps missed you.
Just go now to www.arp-warp.org, download the package and install -
everything should be fine.
Best regards,
Victor
Pedro M. Matias
Hi,
I have used the Art Robbins "hydra" to transfer reagents from deep well
block to crystallisation plate, prior to using a mosquito to setup the
drops. Assuming they are still available (this was about 4 yrs ago) the
hydra was robust and easy to use.
HTH,
Dave
--
Delivered via an Android.
O
The attached modified install script strips off leading zeroes
Phil
(change name "-sh" to ".sh")
install_csh-sh
Description: Binary data
On 11 Mar 2010, at 08:42, Pedro M. Matias wrote:
> Hi.
>
> I don't know whether other people had this problem, but I've tried to install
> arp_warp
Oh dear, arp warp still has not learned counting then?
On Thu, Mar 11, 2010 at 08:42:38AM +, Pedro M. Matias wrote:
> Hi.
>
> I don't know whether other people had this problem, but I've tried to
> install arp_warp 7.1 with CCP4 6.1.3 and the installation failed because
> the refmac versi
Hello Claudia,
have you thought of, instead of rules, using restricted proteolysis combined
with N-terminal sequencing in order to better estimate a good position at least
for the N-terminal part of your protein?
Tim
On Thu, Mar 11, 2010 at 09:26:53AM +0100, Anastassis Perrakis wrote:
> Hi -
>
>
Hi.
I don't know whether other people had this problem, but I've tried to
install arp_warp 7.1 with CCP4 6.1.3 and the installation failed
because the refmac version is 5.5.0109. There's a conditional branch
in the installation script that extracts the "0109" from this and
does not like the l
Hi -
I do not think there are "rules". There is a logic, to never truncate
within secondary structure elements, and to prefer to delete regions
that have a high probability to be disordered.
With excuses for the non-ccp4 plugin, you can use our web server to
help you design these.
http:
21 matches
Mail list logo
