Re: [ccp4bb] MR problem

2011-12-05 Thread Eleanor Dodson
One possibility is to use buccaneer to build the unknown protein, building into the map phased on the known one. This can wor very well.. Eleanor On 12/04/2011 04:18 AM, Ping Wang wrote: Dear all, Recently I have a dataset with a protein complex including two proteins. Each structure of the

[ccp4bb] 4th Winter School on soft X-rays in Macromolecular Crystallography

2011-12-05 Thread Gordon Leonard
Hi Everyone, just a reminder about this. Yours Gordon 4th Winter School on soft X-rays in Macromolecular Crystallography   We are pleased to announce that the 4th Winter school on soft X-rays in Macromolecular Crystallography will take place at the European Synchrotron Radiation Facility, Gre

Re: [ccp4bb] Software for showing crystal packing

2011-12-05 Thread Eleanor Dodson
Beware: Nothing works very well if you have more than 1 molecule and they are distant from each other.. I usually start from PISA which will try to make a sensible assembly, then start from there.. Eleanor On 12/03/2011 04:08 AM, Roger Rowlett wrote: Swiss PDB viewer will do this. Also XPAN

Re: [ccp4bb] installation CCP4 on Win 7

2011-12-05 Thread Marcin Wojdyr
Hi, It's hard to tell what's the problem, perhaps the installer is corrupted and you can re-download it and try again. You may try this one: ftp://ftp.ccp4.ac.uk/mww/CCP4-6.2.2.msi (it's 6.2.0 regardless the filename, the same content in new package) Best, Marcin _

[ccp4bb] AUC2012 in San Antonio, Texas

2011-12-05 Thread Dave Scott
Hello all in CCP4BB-land. The 2012 Analytical Ultracentrifuge conference will be held in San Antonio, Texas March 25th-30th. It will include workshops, symposia and round table discussions on the latest developments in the field. There will be speakers from both the macromolecular structural an

[ccp4bb] NE-CAT Low Resolution Workshop

2011-12-05 Thread Kay Perry
Dear Macromolecular Crystallography Community, NE-CAT hosted a workshop on Advances in Low to Moderate Resolution Phasing and Refinement in September. We have compiled abstracts, powerpoint presentations, video, and audio of the event at our website. If you were unable to attend, but have int

Re: [ccp4bb] Software for showing crystal packing

2011-12-05 Thread Eric Pettersen
On Dec 3, 2011, at 4:00 PM, Yuri Pompeu wrote: Hello everyone, Whats a "good" software for showing crystal packing and unit cell, axes , etc... I know pymol and coot will do it but would love to hear other possibilities/ideas. Chimera's Unit Cell tool can do this. http://www.cgl.ucsf.edu

[ccp4bb] weird HKL2000 behavior

2011-12-05 Thread Teresa De la Mora
Hi everybody We have a weird problem with HKL2000 during indexing and refinement. We load the images and pick spots fine then we click on indexing and after we select P1 we observed that there is no statistical values on the refinement table, no numbers for cell unit or for chi2 values, I

[ccp4bb] ccp4 on Win7 'clipper::Message_fatal'

2011-12-05 Thread Yuri Pompeu
Dear Developers, I was trying to get ccp4 up and running on a Windows7 pc, and even though the installation proceeds smoothly, I cant get any task to finish succesfully. Below is what the log file has to say about it. I saw someone having trouble with the windows install as well. I have the inst

[ccp4bb] postdoctoral position at Princeton University

2011-12-05 Thread Alexei Korennykh
A postdoctoral position is available in the laboratory of Prof. Alexei Korennykh. My group focuses on structural biology and mechanisms of receptor signaling in stress and immune responses. Interested candidates may email CV, three reference contacts and cover letter to akore...@princeton.edu.

Re: [ccp4bb] installation CCP4 on Win 7

2011-12-05 Thread SUBSCRIBE CCP4BB Huo tong
Thank you for all your advices! This time the window keeps staying on the screen. It says "Program too big to fit in memory". My PC has 2G memory, and I wonder if this memory cannot satifiy the CCP4. If so, I think I'd rather install it on other work station.