[ccp4bb] Postdoctoral position in Protein:RNA interactions, Sydney, Australia

2012-02-13 Thread Paul Curmi
*FACULTY OF SCIENCE* *SCHOOL OF PHYSICS* *REF. # 8576* *Salary Level A:*A$75,612 -- A$80,874 per year**(plus 17% employer superannuation and leave loading) ** ** A Postdoctoral Research Associate position is available in the Protein Structure Group at the University of New South Wales, Sy

Re: [ccp4bb] problem with coot install

2012-02-13 Thread Bernhard Rupp (Hofkristallrat a.D.)
It might be worthwhile to follow the thread of similar problems on the coot mailing list and a generic solution on the coot-wiki, like http://strucbio.biologie.uni-konstanz.de/ccp4wiki/index.php/Coot#Example:_in stalling_a_64bit_nightly_CentOS5_binary_build_on_64bit_SL6.1 BR -Original Messa

Re: [ccp4bb] problem with coot install

2012-02-13 Thread Paul Emsley
On 14/02/12 08:17, Alexander U. Singer wrote: Hi -- I was installing the latest version of CCP4 6.2.0 on my machine which uses Linux Fedora Core 5. When downloading the CCP4 package, I used the 'generic linux (x86) option'. The package contains an package for Coot v 0.6.2 which I tar'ed and unc

[ccp4bb] problem with coot install

2012-02-13 Thread Alexander U. Singer
Hi -- I was installing the latest version of CCP4 6.2.0 on my machine which uses Linux Fedora Core 5. When downloading the CCP4 package, I used the 'generic linux (x86) option'. The package contains an package for Coot v 0.6.2 which I tar'ed and uncompressed, but when I try to run it, I g

Re: [ccp4bb] Choice of wavelength

2012-02-13 Thread Bernhard Rupp (Hofkristallrat a.D.)
For MIR, you also need to weigh your options. If you want to use anomalous signal for SIRAS/MIRAS, you may want to be above the most prominent or at least a useful edge of your HA. On the other hand, being above an HA edge increases you chance of serious radiation damage. Sometimes you may need

Re: [ccp4bb] Choice of wavelength

2012-02-13 Thread Ed Pozharski
On Mon, 2012-02-13 at 21:02 +, Theresa H. Hsu wrote: > Hi all. > > When collecting data, is there a specific wavelength to be chosen at > synchrotron source? Does it make difference between 0.9 and 1.5 A, for > example? I know it is important for SAD/MAD but how about MIR? > > Thank you. >

Re: [ccp4bb] Choice of wavelength

2012-02-13 Thread jens Preben Morth
If you are not looking for a specific metal, you can play it safe and collect a redundant native data set at 0.9 A and one at 1.5 A, to check for Ca,Cl,SO4 etc and other anomalous scatterers cheers Preben On 2/13/12 10:02 PM, Theresa H. Hsu wrote: Hi all. When collecting data, is there a speci

[ccp4bb] Choice of wavelength

2012-02-13 Thread Theresa H. Hsu
Hi all. When collecting data, is there a specific wavelength to be chosen at synchrotron source? Does it make difference between 0.9 and 1.5 A, for example? I know it is important for SAD/MAD but how about MIR? Thank you. Theresa

Re: [ccp4bb] Best method for weighted averaging of Friedel pairs?

2012-02-13 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Markus, why don't you reintegrate the data with hkl2000 telling the program to treat them as non-anomalous data-set? This should give you scalepack output with the Bijvoet pairs merged and overcome the problem you describe. Cheers, Tim On 02/13

Re: [ccp4bb] Best method for weighted averaging of Friedel pairs?

2012-02-13 Thread Markus Meier
On 11/02/12 02:52 PM, Bryan Lepore wrote: > did you ever get a response on this? it is interesting but nobody > posted publicly. > > -Bryan > Dear Bryan, so far no one replied ... so please find my answer below. If someone disagrees, please post. None of the methods I have described are appropri

[ccp4bb] BM14: Postdoc position and beamtime

2012-02-13 Thread hassan belrhali
Dear all 1/ Last call for the BM14 Postdoc position (see the direct link below). Dead line: 19th February. 2/ Beamtime will be available on BM14* during May-July 2012 period. If you are willing to join a BM14-BAG group of PIs that will apply for BioStruct-X funding (for travel and accommodati