You can try to run your program under strace in order to
get more info about what went wrong.
Look at the end of the trace to have an idea.
strace
On 03/08/2013 02:47 AM, Roger Rowlett wrote:
OK, here is a strange one: I have 4 client machines (3 absolutely
identical hardware) all running ccp4
Dear All,
Sorry for a non-ccp4 question.
I ask this question for a small starting company who wants to find out
which programs are available free of charge for non-academic users.
The ones I am familiar with all are free to academic users but not free
to non-academic users.
Would any one pl
OK, here is a strange one: I have 4 client machines (3 absolutely
identical hardware) all running ccp4i from a central server and 2 of the
4 machines (always the same 2) will fail when running a certain scala
job with a "child killed" error. I can run the same job on the 2 "good"
machines. All
Dear Karthikeyan,
It may indeed be too long length of your PATH variable.
Can you also type
echo $PATH | wc -c
and see what the output is? On my Mac it is 641.
With best regards,
Victor
On 07/03/2013 14:38, S. Karthikeyan wrote:
Dear CCP4BB members,
I am trying to run arp_warp classic (7.3
Dear Karthikeyan,
In order to trace the error may I ask you, please, to change the first line in
auto_tracing.sh by adding -x as option to csh:
#!/bin/csh -xf
and then rerun the command to see where it stops.
Cheers,
Ioan
P.S. I remember that I have seen that kind of error (for shell scripts
Yes the exact result after rounding will depend on the order of arithmetic
operations and even an apparently insignificant change to the high-level
code can change the order in which an optimising compiler generates the
corresponding machine code. The operation order can also be influenced by
diff
Dear Ed,
It is not usual to find small discrepancies in floating point
calculations. A simple test to demonstrate this is to calculate
sum 1.0/n n=1->100 and n=100->1. You might find
that the results differ. For 4-byte reals will tend to differ in the
6th significant digit and
Nope, it is not working. Just for information, if I give the command
auto_tracing.sh, it prints the 'help' text file...
-Karthik
On 3/7/2013 7:11 PM, Santosh Panjikar wrote:
try
tcsh auto_tracing.sh datafile ../psp.mtz
Santosh Panjikar, Ph.D.
Scientist
Australian Synchrotron
800 Blackburn
try
tcsh auto_tracing.sh datafile ../psp.mtz
Santosh Panjikar, Ph.D.
Scientist
Australian Synchrotron
800 Blackburn Road
Clayton VIC 3168
Australia
Ph: +61-4-67770815 (mobile)
+61-3-85404276 (office)
From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC
Dear CCP4BB members,
I am trying to run arp_warp classic (7.3 version) through ccp4i (CCP4 6.3) in
CentOS system. However, it gives the following error even for the example files
provided with Arp/Warp. Any suggestions are welcome.
---
QUITTING ... AR
I'm using gcc 4.7.2 (latest stable version I think). I don't get the
compilation error of the FORMAT statement but I do get the segfault error
on running with the '-malign-double' switch that I reported. So it would
appear that even the current stable version is buggy! As Jon said the
workaround
Hi Jon,
Thanks for the feedback. The version I am using (which is not that
reported in the web page you mention, Version: 4:4.3.2-2) is:
GNU Fortran (GCC) 4.4.6 20120305 (Red Hat 4.4.6-4).
Hence it appears that the bug hasn't been entirely dealt with. Ian
Tickle was getting segmentation fault
Dear Fred,
I would say that you're using a buggy gfortran version
(http://lists.debian.org/debian-gcc/2009/03/msg00070.html). You may
want to check your version with 'gfortran --version' in order to be
sure of it. The '-malign-double' switch provides only a slight
optimization and as you have alre
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