[ccp4bb] Probleme with D-peptide cif dictionary with refmac5.8

2014-10-21 Thread LEGRAND Pierre
Dear all, A quick note to report the problems I have experienced (and a solution) with the refinement of a peptide containing both D- and L-amino-acids with refmac5.8 (Refmac_5.8.0073). This refinement was done with high resolution data, with hydrogens included in the model (important to rememb

Re: [ccp4bb] Normal mode refinement

2014-10-21 Thread Appu kumar
Dear All, Thank you very much for valuable suggestions and educating me on the normal mode refinement. Actually, I am trying to refine a protein (cytosolic domain and trans-membrane domain). I found a solution through PHASER and density looks really good in both domain but as i proceeds with refine

Re: [ccp4bb] Normal mode refinement

2014-10-21 Thread Appu kumar
Dear All, Thank you very much for valuable suggestions and educating me on the normal mode refinement. Actually, I am trying to refine a protein (cytosolic domain and trans-membrane domain). I found a solution through PHASER and density looks really good in both domain but as i proceeds with refine

Re: [ccp4bb] Normal mode refinement

2014-10-21 Thread Ethan Merritt
On Tuesday, 21 October 2014 07:39:53 AM Appu kumar wrote: > Dear All, > Thank you very much for valuable suggestions and educating me on the normal > mode refinement. Actually, I am trying to refine a protein (cytosolic > domain and trans-membrane domain). I found a solution through PHASER and > de

[ccp4bb] 10 DAYS REMAIN to apply for the DLS/CCP4 data analysis workshop

2014-10-21 Thread David Waterman
Dear all, Please be aware that the application period for the first DLS/CCP4 data analysis workshop closes on the 31st October. Successful applicants will be notified shortly after that date. As a reminder, the workshop is intended for PhD students, postdocs and early career scientists who are *c

[ccp4bb] Position available: Software Release Engineer - SBGrid

2014-10-21 Thread Michelle Ottaviano
Apply at the Harvard Auto req ID34021BRBusiness TitleSoftware

[ccp4bb] Calculating over all bend in a DNA

2014-10-21 Thread Sasha Pausch
Hello CCP4bb, May I know how can we calculate or use any server which can calculate the overall bend in a DNA (crystal structure)?