[ccp4bb] Job posting - Sr. Technical Leader for Solution Biophysics

2016-10-27 Thread Bussiere, Dirksen
The Structural and Biophysical Chemistry group at Novartis-Emeryville is seeking to recruit a B.S./M.S. level scientist with experience in solution biophysics and structural biology. The description of the position can be found online at: https://sjobs.brassring.com/tgwebhost/jobdetails.aspx

[ccp4bb] AW: [ccp4bb] AW: [ccp4bb] intensity statistics and twinning

2016-10-27 Thread Hillen, Hauke
Agreed, and this is ongoing work. Yet it is not trivial to get better resolution than this for small (in the world of EM) samples either. Von: Mark van Raaij [mjvanra...@cnb.csic.es] Gesendet: Donnerstag, 27. Oktober 2016 22:08 An: Hillen, Hauke Betreff: Re

[ccp4bb] AW: intensity statistics and twinning

2016-10-27 Thread Hillen, Hauke
Dear Jacob, So far, I have only built an inital model into the "experimental" MR-SAD map, which is not complete. I am now playing with different refinement strategies (mainly rigid body). Both R and Rfree have not dropped below 40 (43/44 current best). These are the statistics XDS reports. This

[ccp4bb] AW: [ccp4bb] intensity statistics and twinning

2016-10-27 Thread Hillen, Hauke
Dear Mark, Thanks for your reply. Unfortunately, I have already spent a lot of time trying to do exactly this. I do think some biologically relevant questions can be answered by architecture at this resolution, so I would like to try to get the most out of these datasets I can. Best wishes, Ha

Re: [ccp4bb] intensity statistics and twinning

2016-10-27 Thread Keller, Jacob
It would be helpful to know what your current R values are in modelling, and also the merging statistics. It looks like you might have a twinned p1 crystal. JPK From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Hillen, Hauke Sent: Thursday, October 27, 2016 3:11 PM To: CCP4B

[ccp4bb] intensity statistics and twinning

2016-10-27 Thread Hillen, Hauke
Dear ccp4 community, I am currently working on some low resolution datasets (around 4.5A). The space group seems to be P21, as suggested by XDS and pointless. I have collected many datasets of these crystals, both native as well as SeMet-labeled. Using MR-SAD I have been able to obtain a clearl

Re: [ccp4bb] Good 3D Monitor for Molecular Modelling

2016-10-27 Thread Folmer Fredslund
Hi Matt, Have you tried looking at these pages: http://strucbio.biologie.uni-konstanz.de/ccp4wiki/index.php/Stereo https://pymolwiki.org/index.php/Stereo_3D_Display_Options HTH, Folmer Fredslund On 2016-10-27 17:20, Matthew Graf wrote: Hello All, I am looking for suggestions on a good, but no

Re: [ccp4bb] Good 3D Monitor for Molecular Modelling

2016-10-27 Thread Gert Vriend
Hai Matt, If you are not interested in hard-core crystallography stuff like interpreting electron-density maps or couplings to Coot or Refmac, then I can certainly recommend that you look at Yasara. We use it for 15 years already for modelling and many different visualizations (and much more)

[ccp4bb] GUP deadline approaching for APS Beamtime at NE-CAT

2016-10-27 Thread Salbego, Cyndi
NE-CAT is accepting GUP proposals for the 2017-1 run cycle. Please choose 24-ID-C or 24-ID-E as your first choice to be scheduled with NE-CAT! The 24-ID-C beamline can deliver X-rays in the range of 6 to 21 keV or ~2.1 to 0.5 Å. This covers most of the popular elemental edges for phasing. This

[ccp4bb] Good 3D Monitor for Molecular Modelling

2016-10-27 Thread Matthew Graf
Hello All, I am looking for suggestions on a good, but not too costly, 3D monitor for visualizing pdb structures and looking at outputs of modelling programs. I am not personally a structural biologist, but am on the hunt for someone who is. All help appreciated.Kind regards,Matt

[ccp4bb] Postdoctoral position in membrane protein structural biology

2016-10-27 Thread Ieva Vasiliauskaite
Labex Epigenmed Postdoctoral Scientist -Membrane Protein Structural Biology- Montpellier, France A two years post-doctoral position, funded by the Labex Epigenmed (https://www.epigenmed.fr/index.php/accueil/labex-overview), is available in the Granier lab at the “Institut de Génomique Fonct

Re: [ccp4bb] New version SHELXL 2016/6 and PDB2INS

2016-10-27 Thread Robert Esnouf
Dear Phil, The message indeed relates to picking up the system libc which is too old for the declared dependency in the make scripts. RedHat/CentOS/ScientficLinux are all based on 2.x kernels and upgrading on that path is unlikely to satisfy the dependency. It seems there are three ways aroun

[ccp4bb] Phoenix crystallisation robot

2016-10-27 Thread Inge Van Molle
Dear all, We are looking for someone to take over our Art Robins Phoenix crystallisation robot, including the base module with 96 syringe head, wash module, nano module and humidifier chamber. The robot was purchased in 2008 and is in perfect condition. Please contact me for more information. P