Dear Oliviero,
The suggestion made by Tim Grüne is probably best, you didn't specify
exactly what you have in the mmCIF file.
Anyway, openbabel should be able to read mmCIF files and write a CIF,
(https://openbabel.org/wiki/MmCIF)
Best regards,
Folmer
On 2017-11-14 14:16, Oliviero Carugo w
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Dear All,
I would like to remind you about the “*Prato cryoEM course*” from* 9th to
13th of April 2018*.
Registrations will close on December 1st, and currently there are still
sits available.
The course aims at PhD students and researchers with little experience in
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Dear Oliviero,
depending where the mmCIF originates from, and provided you have data with it,
it might be easiest to go
mmCIF -> PDB -> SHELXL (via PDB2INS) -> CIF (via the SHELXL ACTA command).
Best,
Tim
On Tuesday, November 14, 2017 2:16:06 PM CET Oliviero Carugo wrote:
> Dears,
>
> does any
>>Isn’t that exactly the idea of a patent? Instead of keeping the invention
a trade secret (occasionally a viable alternative) you publish the invention,
and the inventor (and in general, the supporting institutions) can get
rewarded if someone plans to use the idea commercially.
I agree with this
Dears,
does anybody know how to transform an mmCIF file of the Protein Data
Bank into a CIF file (the slightly different format used in small
molecule crystallography)?
Thanks,
Oliviero
Dear Yuvaraj,
Jim Pflugrath worked with a few brilliant high school student interns one of
the summers before he retired and made this video to demonstrate how easy it is
to do a ‘halide swish’ to incorporate iodide into crystals of macromolecules
for home laboratory de-novo SAD phasing using C
Dear ccp4 community,
I would like to draw your attention to the following course, which is
now open for registration:
EMBO Practical Course on *Characterization of macromolecular complexes
by integrative structural biology*
May 12-19, 2018
EPN campus
Grenoble, France
http://meetings.embo.org/
Remember DNA can generate some very strong reflections along the stacking
axis.
But 2outliers" can mean anything - as Herman says look at the images.
Aimless shows you a plot of where they are - and gives a list.. - they may
be associated with ice rings? or just diffraction problems.
On 14 No
Most metals give a reasonable anomalous signal at CiKa.
at 1.75A S f" is ~ 0.8 Se ~ 1.4
That is not very strong - you would need pretty good data to see the
signal, but aimless analyses the CCanom for you.
There are lots of sites to tell you what f" is likely to be for all atom
types- CHOOCH
Hi
I'll assume you mean that you want to change the direct beam position - in
iMosflm it's easy, and the best way for you to proceed is to follow the
tutorial on the website - see files on
http://www.mrc-lmb.cam.ac.uk/harry/imosflm/ver721/documentation.html
especially
http:
Dear all,
How to change the origin of the reflection from the default value in
imosflm or DIALS during Indexing. Is there any way to do it in CCP4i or
CCP4i2 GUI.
Thanks
Yuvaraj
--
Dear all
What are the chemicals which give an anomalous signal at home
source (Cu *K*α radiation) apart from Lathanides and Zinc acetate. What are
the things I should taken care of to get sufficient anomalous signal to
solve the structure.
I have crystal data without anomalous signal a
Dear all,
How to change the origin of the reflection from the default value in
imosflm or DIALS during Indexing. Is there any way to do it in CCP4i or
CCP4i2 GUI.
Thanks
Yuvaraj
Dear Radhika,
What reason does Xtriage give for declaring the reflections to be outliers? Too
weak, too strong, other reasons? As was mentioned before, what is the
resolution of your data? In cases like this, it is always good to have a look
at the diffraction images to see if there is some pro
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