Hi Nick
I noticed this today when I was researching the differences between mmCIF and
modelCIF - but thanks anyway.
I haven't tried running it yet, but the important thing for me is to be able to
convert my bare-bones PDB format files to something that AlphaFill will accept
- and as the
Hi Harry,
I did stumble upon this python mmCIF handler for modelCIF:
https://github.com/ihmwg/python-modelcif/blob/main/examples/README.md
Maybe this will have something of use to your efforts?
Best,
Nick Clark
Nicholas D. Clark (He/Him)
PhD Candidate
Malkowski Lab
University at Buffalo
The Sosa Laboratory in the Albert Einstein College of Medicine is currently
seeking a highly motivated and talented Postdoctoral Researcher to join our
group. Research in our lab is dedicated to uncovering the mechanisms of action
of various biological macromolecular machines, employing a
Hi folks
I’ve made considerable progress in getting to the bottom of this problem. From
what I can gather, AlphaFold writes “modelCIF”, which is not quite the same as
“mmCIF”, and just saying “CIF” is not unambiguous. So I guess I should have
been more aware of this when posting my original
