Hello one and all !!

I have been working on cloning and purification aspects on a Leishmanial 
cysteine peptidase (pI= 8.2) for quite some time. I had cloned it in pGEX 
expression vector. Expression seemed quite okay when induced with 0.5 and 1mM 
IPTG, so did the solubility in 4 buffers at different pH conditions. i. e.  
Tris (6.8), HEPES (7.5), Bicine (pH = 9) and Glycine (pH=10). The problem is 
when I purify it using glutathione sepharose column I get only GST (size wise 
estimation; no western tried ) i.e. a  prominent 25 KD band. At the same time I 
get the fusion protein in the load, equilibration and  wash fractions. When I 
increased Nacl concentration upto 400 mM  I only could exclude the fusion 
protein band from wash. I had tried protease inhibitors like PMSF, sigma 
cocktail, and DTT in the lysate before sonication. I had also tried reduced 
glutathione upto 40 mM in the elution buffer with two different pH at 8 and 9.  

        I also read from literature that similar intracellular cysteine 
proteases behave same even after mutating the conserved cysteine residue at its 
active site. They all say that its not because of autocatalytic property of the 
enzyme its because of some proteases from E.coli.

Should I try ion exchange or affinity chromatography using any inhibitor of 
this enzyme??

Can anyone suggest me some tip?? Guys help me out. i am  kind of struck here
 
 

Ashok Ranjan Nayak
Research Scholar
Molecular and Structural Biology Division
Central Drug Research Institute,
Lucknow

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