Hi Joe,
Here are some links that he might find helpful:
https://www.thingiverse.com/thing:222918
https://www.thingiverse.com/thing:396459
>From the instructions on the second link:
"The STL File of this protein was created using PyMOL, First, you download
the PDB file from the protein databank
Hi Everyone,
Can anyone tell me a relatively easy way to generate an omit density map for
a ligand? I know that CNS can do this, but I was wondering if there's a CCP4
related program to generate omit maps.
Thanks,
Kathleen
Returning to the previous discussion, we've had luck crystallizing several
proteins with a His-tag. We've used both N-terminal and C-terminal his tags,
and have had success with both of them. In one of our structures, the his
tag actually formed an interface for crystal packing.
We have also tried
Hi Everyone,
I've been using programs ligplot and ligand explorer to view protein-ligand
and protein-cofactor interactions of a structure I've recently solved. Can
anyone suggest a better program to view these interactions? Ligand explorer
seems to only show distance (and not geometric) dependent
Hello.
I am trying to refine a structure that has 2 ligand conformations as seen in
the electron density. I tried to put both conformations in Coot and format
the PDB similar to a residue alternate conformation and changing the
occupancies to 0.50 for each conformation. This formatting did not wor
