Re: [ccp4bb] Problem with ligand identification

2023-11-15 Thread Pallan, Pradeep S
Hi Rafal, Did you try oxalic acid? The density being close to His, and with the shape, give it a try! Good luck! Pradeep Pallan From: CCP4 bulletin board on behalf of Rafal Dolot Sent: Wednesday, November 15, 202

[ccp4bb] REFMAC5 refinement: nucleic acid residues with bad geometry

2022-04-08 Thread Pallan, Pradeep S
REFMAC5 refinement: nucleic acid residues with bad geometry Hi All, I am in the final refinement stage of an X-ray structure of a protein-DNA complex, 2.3 A resolution, using Refmac5 (REFMAC 5.8.0267, CCP4Interface 7.1.018, Linux platform). I am confident about the space group, refinement steps,