[ccp4bb] stop

2019-08-08 Thread Skrzypczak-Jankun, Ewa
Please stop sending email to my address ewa.skrzypczak-jan...@utoledo.edu thank you To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1

Re: [ccp4bb] books to go

2014-05-06 Thread Skrzypczak-Jankun, Ewa
have resources. Best regards - Ewa SJ From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Skrzypczak-Jankun, Ewa [ewa.skrzypczak-jan...@utoledo.edu] Sent: Wednesday, April 23, 2014 3:33 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] books to go Hi, I h

[ccp4bb] books to go

2014-04-23 Thread Skrzypczak-Jankun, Ewa
Hi, I have a collection of books that I would gladly give away to someone who may cherish them. The list is enclosed. :) Ewa SJ Ewa Skrzypczak-Jankun, PhD DH r.2250 Prof. emerita

Re: [ccp4bb] Additional band on gel due to his-tag: any references?

2010-10-28 Thread Skrzypczak-Jankun, Ewa
Additional band on a gel might not be caused by his-tag. It is often a result of different conformation/molecular shape and so the molecule travels with different speed in the gel. We may wish for a homogenous sample (chemically and structurally) but this is seldom true See example: Int J

[ccp4bb] Prof. Lodovico Riva di Sansevenino

2010-06-28 Thread Skrzypczak-Jankun, Ewa
I will always remember his singing. I still has the booklet with songs that he collected years ago and wonder if it will ever be published for the crystallographic community. Those evenings of singing with Lodovico were wonderful and jolly celebrations of life. If we want to celebrate his memory

Re: [ccp4bb] two identical proteins in one asymmetric unit

2009-03-24 Thread Skrzypczak-Jankun, Ewa
I have seen proteins refined as 'the same', modeled to an averaged map etc only to have one of them with much higher Bj because most likely they are NOT the same so watch out by treating them as 'the same' you are losing the very valuable information that you might be looking for Ewa *

[ccp4bb] interface

2008-08-07 Thread Skrzypczak-Jankun, Ewa
What is the best and user-friendly program to calculate a surface of the interface between two proteins? Or two domains? Is there any common criteria how to define boundary for that interface (other than van der Waals distance)? Thanks in advance for good tips - Ewa

Re: [ccp4bb] Activity of a mutant enzyme compared to wild type - puzzle

2008-06-12 Thread Skrzypczak-Jankun, Ewa
Let us not forget about the very fact that X-ray is an ionizing radiation and a potent creator of radicals! Please see these references - seeing a crystal that was purple in the middle (0.3mm radius of beam) and perfectly yellow at edges (crystal was >0.5mm long) was an eye opening experience. H

[ccp4bb] FW: [ccp4bb] Different chains in the dimer

2008-02-08 Thread Skrzypczak-Jankun, Ewa
Have you done both experiments at the same temperature? If cryo - have you used the same cryoprotectant? same ionic strength? Did mutations cause changes in the surface charge distribution/hydrophobic/hydrophilic/ pi...pi interactions - if yes how it can effect quaternary structure of native. Do