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From: CCP4 bulletin board on behalf of Tânia Oliveira
Sent: Fri 3/28/2008 5:20 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] 3D structure based alignment
Hello,
I´m having a problem that I would like to know if someone could help me.
I want to do a 3D structure based alignment of my protein
Hello,
I´m having a problem that I would like to know if someone could help me.
I want to do a 3D structure based alignment of my protein with another one.
The problem is that my protein has 2 domains, and the structure that I want
to superimpose just have one. I can do the structure
Hallo Tânia,
you can try 'Rapido' by R. Mosca and T. Schneider at EMBL Hamburg. It is
available as a web application under:
http://webapps.embl-hamburg.de/rapido/
Best wishes,
Gerrit Langer.
Tânia Oliveira wrote:
Hello,
I´m having a problem that I would like to know if someone could help
Hi,
You can use Chimera to do the work .
Good Luck!
liu
Tânia Oliveira wrote:
Hello,
I´m having a problem that I would like to know if someone could help me.
I want to do a 3D structure based alignment of my protein with another
one. The problem is that my protein has 2 domains, and the
