Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-11 Thread Vellieux Frédéric
. From: James Foadi [mailto:james_fo...@yahoo.co.uk] Sent: Tuesday, July 11, 2017 10:03 AM To: Vellieux Frédéric <frederic.velli...@ibt.cas.cz>; CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming Hello Frederic. Interesting. Have you got some ref

Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-11 Thread James Foadi
43 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming What is the difference between Rmerge and Rsym - I thought they were the same? Rrim == Rmeas I think Phil > On 10 Jul 2017, at 15:18, John Berrisford <j...@ebi.ac.uk> wrote: > &

Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-11 Thread Vellieux Frédéric
ers, Fred. -Original Message- From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Phil Evans Sent: Monday, July 10, 2017 5:43 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming What is the difference between Rmerge and Rsym -

Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-10 Thread Peter Keller
On 10/07/17 16:42, Phil Evans wrote: What is the difference between Rmerge and Rsym - I thought they were the same? Rrim == Rmeas I think The descriptions and formulae for most of these R values as used by the PDB can be found in the pdbx exchange dictionary, in the REFLNS_SHELL category.

Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-10 Thread Phil Evans
What is the difference between Rmerge and Rsym - I thought they were the same? Rrim == Rmeas I think Phil > On 10 Jul 2017, at 15:18, John Berrisford wrote: > > Dear Herman > > The new PDB deposition system (OneDep) allows you to enter values for Rmerge, > Rsym, Rpim, Rrim

Re: [ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-10 Thread John Berrisford
Dear Herman The new PDB deposition system (OneDep) allows you to enter values for Rmerge, Rsym, Rpim, Rrim and / or CC half. If, during deposition, you do not provide a value for any of these metrics then we will ask you for a value for one of them. Also, PDB format is a legacy format for

[ccp4bb] AW: [ccp4bb] Rmergicide Through Programming

2017-07-10 Thread Herman . Schreuder
Dear All, For me this whole discussion is an example of a large number of people barking at the wrong tree. The real issue is not whether data processing programs print amongst many quality indicators an Rmerge as well, but the fact that the PDB and many journals still insist on using the