[ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Clayton, Gina Martyn
Dear Everyone Slightly off topic... I am trying to colour a structure by B factor in Pymol. More specifically I am colouring conserved residues (value in b factor). I want to use 4 colours - say white, yellow, orange, red. However it seems that Pymol now only allows 3 colours to be used - I t

Re: [ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Rob Nicholls
Hi, I'm aware of two ways to do this: by writing the colour as a word, e.g: color white, (mypdbfile//A/*/*) which will colour a whole chain. Or by using rgb colours, e.g: set_color newcolor0 = [1,1,1]; color newcolor0, (mypdbfile//A/2/*) which will colour individual residues (residue 2 in this

Re: [ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Robert Campbell
Hi Gina, On Wed, 31 Mar 2010 15:00:34 -0400 "Clayton, Gina Martyn" wrote: > I am trying to colour a structure by B factor in Pymol. More > specifically I am colouring conserved residues (value in b factor). I > want to use 4 colours - say white, yellow, orange, red. However it > seems that Pymo

Re: [ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Clayton, Gina Martyn
b Nicholls Sent: Wednesday, March 31, 2010 3:14 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] B factor Coloring in Pymol Hi, I'm aware of two ways to do this: by writing the colour as a word, e.g: color white, (mypdbfile//A/*/*) which will colour a whole chain. Or by using rgb colours,

Re: [ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Clayton, Gina Martyn
Subject: Re: [ccp4bb] B factor Coloring in Pymol Hi Gina, On Wed, 31 Mar 2010 15:00:34 -0400 "Clayton, Gina Martyn" wrote: > I am trying to colour a structure by B factor in Pymol. More > specifically I am colouring conserved residues (value in b factor). I > want to use 4

Re: [ccp4bb] B factor Coloring in Pymol

2010-03-31 Thread Clayton, Gina Martyn
@JISCMAIL.AC.UK Subject: Re: [ccp4bb] B factor Coloring in Pymol Hi Gina, On Wed, 31 Mar 2010 15:00:34 -0400 "Clayton, Gina Martyn" wrote: > I am trying to colour a structure by B factor in Pymol. More > specifically I am colouring conserved residues (value in b factor). I > want to