Hi all,
How to convert CNS coordinate file to PDB file format that can be used for
refinement in
refmac. Is there any utility in CCP4 or other GUI based interface that can
convert CNS output
file to PDB .
Thanks .
Manoj
Penn Sate University
Biochemistry
State College
PA
The CNS script cns_to_o.inp will convert CNS .mtf
files to .pdb files. You can edit the CNS form using the CNS web
interface and then run the script from the command line. Alternatively,
I think the CCP4 program COORDCONV will convert XPLOR/CNS files to PDB
format (I haven't done this, however.
Hi
Thanks for your quick response.
a) I have used CNS script cns_to_o.inp and then used the CCP4 COORDCONV
utility with
convert file in PDB to PDB option and input the unit cell information.
(have tried Xplor to PDB option earlier, it failed with input error).
b) Then I run refmac
Manoj Saxena wrote:
Hi all,
How to convert CNS coordinate file to PDB file format that can be used for refinement in
refmac. Is there any utility in CCP4 or other GUI based interface that can convert CNS output
file to PDB .
Thanks .
Manoj
Penn Sate University
Biochemistry
State College
P
That could be due to anything - a really useless message..
You arent trying to rerun an older refmac script are you - the rerun job
button was broken at some point.
If you "reset defalt parameters" and then set up the job again it might
work..
Eleanor
Manoj Saxena wrote:
Hi
Thanks for yo