Re: [ccp4bb] Crosslinking software doubt

2020-06-08 Thread Georg Mlynek
Dear Jesus, you should look at https://www.rappsilberlab.org/software/ or https://www.maxquant.org/ Altough there have been huge strides in recent years in software development, XL-MS data processing need still some effort. Br, Georg. Am 2020-06-08 um 9:48 AM schrieb JESUS BALTANAS COPADO:

Re: [ccp4bb] Crosslinking software doubt

2020-06-08 Thread Eleanor Dodson
Well - there is a CCP4 program seqwt which will give the molecular weight of the given sequence (s). You say you know the molecular weight of the crosslink and of the whole complex.. But then I dont know of any software which can predict the composition - I think you will have to do the arithmetic

[ccp4bb] Crosslinking software doubt

2020-06-08 Thread JESUS BALTANAS COPADO
Hi all! I am new in crosslinking,  We performed in our group some time ago crosslinking, and need help with the data processing. We only have available the molecular weight of the crosslinked peptides, so the idea would be to find a free sofware in which you could enter the whole sequence