Re: [ccp4bb] MSA formatting...

2009-09-13 Thread tommi kajander
thanks for all who replied, got the answers already in several flavours i believe! tommi On 14.9.2009, at 2.46, Tim Gruene wrote: Hello Tommi, could you please paste one or two lines of what you've got and one or two lines of what you want. That might make the problem description a bit

Re: [ccp4bb] MSA formatting...

2009-09-13 Thread Tim Gruene
Hello Tommi, could you please paste one or two lines of what you've got and one or two lines of what you want. That might make the problem description a bit easier. Tim -- Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A On Sun, 13 Sep 20

Re: [ccp4bb] MSA formatting...

2009-09-13 Thread Tommi Kajander
...actually now i remember the problem was that i want it in excel with 800 column and each amino acid needs to be separated to a column (ie comma between each position) excel puts "words" into one column. bit tedious to define columns by hand maybe wrong forum, but thanks anyway.. t

[ccp4bb] MSA formatting

2009-09-13 Thread Tommi Kajander
Hi, off-crystal topic: i was wondering if anyone has a simple solution to combining e.g. CLUSTAL etc ouput files to format (ie idcodes then 60 residues strech and start again below the same...) ...that has only one line per sequence. hopefully that was clear enough... basic problem is simpl