Re: [ccp4bb] Off Topic: Fixed point sequence alignments

2011-01-25 Thread Martin Hallberg
Hi, "Indonesia" is great for this. http://xray.bmc.uu.se/dennis/ Cheers, Martin On Jan 25, 2011, at 10:50 PM, Katherine Sippel wrote: > Hi all, > > I was wondering if you know of a program that can do protein sequence > alignments around experimentally determined equivalent residues (i.e.

[ccp4bb] Off Topic: Fixed point sequence alignments

2011-01-25 Thread Katherine Sippel
Hi all, I was wondering if you know of a program that can do protein sequence alignments around experimentally determined equivalent residues (i.e. biochemists have determined via mutagenesis and kinetics that residues 3,6 and 9 of protein X are the equivalent of residues 7, 14, 21 in homologous p