Re: [ccp4bb] Off topic: PKa of protein-DNA complex.

2010-08-14 Thread John R Helliwell
Dear Yang, There are several. I also commend to you:- Crystallography Reviews, Volume 15, Issue 4 October 2009 , pages 231 - 259 An evaluation review of the prediction of protonation states in proteins versus crystallographic experiment  Authors: Stuart J. Fisher; James Wilkinson; Richard H.

[ccp4bb] Off topic: PKa of protein-DNA complex.

2010-08-12 Thread yang li
Hi, Is there any server or program can calculate the theoretic PKa of the protein-DNA complex? Given the structure of the protein and the sequence of the DNA. Any suggestion will be appreciated! Best Yang