Dear Armando,
don't know about NACCESS, but I guess it is superseded by AREAIMOL in CCP4
(also in CCP4i); it outputs the accessible volume per atom in the pdb file and
per residue and per chain and some other statistics in the log-file.
Mark
Quoting Armando Albert:
Does anyone has got some
Hi Armando,
The information can be found here:
http://www.bioinf.manchester.ac.uk/naccess/
It looks like you'll need to compile it from source code. I can help you
with this, if you're unsure.
It also plugs in nicely to the excellent LIGPLOT, which I have found
incredibly useful (and, by
I think one of the options of PISA is to calculate accessibilities -- I
recall when I was learning how to use pisa that I saw this option.
Also DSSP outputs accessibilities per residue
Areaimol in ccp4 does too.
I have seen many programs in the internet, google accessibilities,
accessible
On 06/17/2011 05:25 PM, Armando Albert wrote:
Does anyone has got some information about how to get a mac version (intel), of
the old unix program naccess?. It was meant to calculate the solvent
accessibility per residue from a pdb file.
Armando
Maybe this server can do the job:
