Re: [ccp4bb] Refmac dictionary

2019-04-02 Thread Sam Tang
Hi My apologies. This is indeed a silly question. It appears I forgot to remove the extra O when linking them together! Sam On Wed, 3 Apr 2019 at 07:21, Sam Tang wrote: > Dear all > > Hello again. > > We have another protein-RNA dataset which we are trying to refine. For > this dataset we hav

[ccp4bb] Refmac dictionary

2019-04-02 Thread Sam Tang
Dear all Hello again. We have another protein-RNA dataset which we are trying to refine. For this dataset we have three OMU nucleotides modelled. We got the monomer from Coot 'Get Monomer'. Refmac returned the following error: ERROR : atom :OP3 OMU 2 CCC is absent in the librar

Re: [ccp4bb] Refmac dictionary problem

2009-04-17 Thread Simon Kolstoe
Thanks to Robbie Joosten who suggested updating to refmac 5.5.0090 which seems to be happy with alternate conformation again. I thought it was probably worth mentioning on the list that the ccp4 bundled refmac has this bug. Simon On 17 Apr 2009, at 14:07, Simon Kolstoe wrote: Dear ccp4

[ccp4bb] Refmac dictionary problem

2009-04-17 Thread Simon Kolstoe
Dear ccp4bb, I've finally gotten around to updating my ccp4 to version 6.1.1 with the default refmac 5.5.0072 that comes with this from the ccp4 downloads site. I am working on relatively high resolution structures with a number of alternate conformers for certain amino acids which I put