Take a look at MAMA from Uppsala Software Factory
http://xray.bmc.uu.se/usf/mama_man.html
It can generate the mask from the PDB file. This will, however, leave
internal cavities belonging to "solvent". If you don't want that, the
following MAMA script will fix it giving you the mask of the pro
Alastair Fyfe wrote:
Does anyone know of software that will segment a unit cell into volume
internal/external to a calculated molecular surface ?
thanks!
Alastair Fyfe
Well, if the surface was generated from some sort of model it is easy to
mask the unit cell map to set all the volume intern
Does anyone know of software that will segment a unit cell into volume
internal/external to a calculated molecular surface ?
thanks!
Alastair Fyfe
